The program is designed to run under:

• PC Windows 3.11, Win95, Win98 or NT (download it) comments to (g.deleage@ibcp.fr) 16 bits and 32 bits available

• PC DOS(download it) comments to (g.deleage@ibcp.fr) no more developed

The package is freely available for academic users from Internet (anonymous ftp to  ftp.ibcp.fr ).

• Features

  • Client/Server mode (Fasta, Blast, Search patterns in proteins, PHD, SOPMA, CLUSTALW) of NPS@ server (C. Combet et al., 2000)

  • Direct loading of results files (CLUSTALW, Blast, Fasta, Secondary structure prediction, ...)

  • Graphic displays

  • Printing

  • Meaning of icons

• Databases

  • Kabsch & Sander (1983) database

  • Rost & Sander (1993) database

  • Site/signature database PROSITE

  • Sequence database Swiss-Prot

• Methods included within ANTHEPROT

  • Sequence information

  • Sequence edition

  • Dot matrix plot

  • Fasta/Blast

  • Sites/signatures detection

  • Physico-chemical profiles

  • Secondary structure prediction

  • Helical wheel projections

  • Binary alignments (dynamic programming NW algorithm)

  • Multiple alignments

  • Prediction of signal peptide and cleavage site

  • 3D display of molecules

  • Amphiphilicity

  • Titration curve

• Disclaimer and bugs

  • This program was developed in order to help scientific users. The user accepts to be fully responsible of all results obtained with ANTHEPROT. The author provides this package as it and if bugs are observed there are no obligation to fix them.

  •  In NPS@ jobs, the network connection has to be effective prior to send request to our server.

• References

• Links to ANTHEPROT

• Acknowledgements

• Statistiques