ANTHEPROT (ANalyse THE PROTeins) is the result of about 10 years of biocomputing activity of a group of the Institute of Biology and Chemistry of Proteins. The main idea was to integrate into a single package most of the methods designed for protein sequence analysis (1,2,3,4). This simple idea was originally supported early in 1988!
The program is designed to run under:
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PC Windows 3.11, Win95, Win98 or NT (download it) comments to (g.deleage@ibcp.fr) 16 bits and 32 bits available
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PC DOS(download it) comments to (g.deleage@ibcp.fr) no more developed
The package is freely available for academic users from Internet (anonymous ftp to ftp.ibcp.fr ).
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Features
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Client/Server mode (Fasta, Blast, Search patterns in proteins, PHD, SOPMA, CLUSTALW) of NPS@ server (C. Combet et al., 2000)
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Direct loading of results files (CLUSTALW, Blast, Fasta, Secondary structure prediction, ...)
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Graphic displays
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Printing
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Databases
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Kabsch & Sander (1983) database
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Rost & Sander (1993) database
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Site/signature database PROSITE
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Sequence database Swiss-Prot
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Methods included within ANTHEPROT
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Helical wheel projections
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Binary alignments (dynamic programming NW algorithm)
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Amphiphilicity
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Disclaimer and bugs
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This program was developed in order to help scientific users. The user accepts to be fully responsible of all results obtained with ANTHEPROT. The author provides this package as it and if bugs are observed there are no obligation to fix them.
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In NPS@ jobs, the network connection has to be effective prior to send request to our server.
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